Nextflow workflow report

[cirro-e5597-f3b76] (resumed run)

Run times

21-Dec-2025 21:14:38 - 21-Dec-2025 21:21:40 (duration: 7m 2s)

  3 succeeded  

  87 cached  

  0 ignored  

  0 failed (0 retries)  

Nextflow command

nextflow run break-through-cancer/btc-spatial-pipelines/main.nf -r 116-downstream-cross-sample-analysis -params-file params.json -resume 49861b5c-d8ba-4baf-9a06-20cf5ddf9664 -name cirro-e5597-f3b76 -latest -ansi-log false -with-report /opt/work/834c4cf3814122d7a431217bf9244dd2/artifacts/report.html -with-timeline /opt/work/834c4cf3814122d7a431217bf9244dd2/artifacts/timeline.html -with-dag /opt/work/834c4cf3814122d7a431217bf9244dd2/artifacts/flowchart.svg -config nextflow-override.config

CPU-Hours

324.3 (100% cached)

Launch directory

/opt/work/834c4cf3814122d7a431217bf9244dd2

Work directory

s3://project-5678660b-483c-470c-a0b1-2476fb01fa56-scratch/workdir

Project directory

/root/.nextflow/assets/break-through-cancer/btc-spatial-pipelines

Script name

main.nf

Script ID

5a95f7d52dc1cd094f2b1163a4ea12a7

Workflow session

49861b5c-d8ba-4baf-9a06-20cf5ddf9664

Workflow repository

https://github.com/break-through-cancer/btc-spatial-pipelines, revision 116-downstream-cross-sample-analysis (commit hash b5f784d3bcd7a24320d6814efd475fb68efcee71)

Workflow profile

standard

Nextflow version

version 25.04.8, build 5956 (06-10-2025 21:19 UTC)